BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H07LP1|AL426114
(391 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 584 e-167
>3x_Contig1619
Length = 7770
Score = 584 bits (289), Expect = e-167
Identities = 312/325 (96%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 1 catacaaattatatatattctatataaaaatatataaaatcattaatactgtatagtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 catacaaattatatatattctatataaaaatatataaaatcattaatactgtatagtaag 279
Query: 61 atatataatataaatatataattttsttcggtcatatgatgtcacatttatagggtacat 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 278 atatataatataaatatataattttcttcggtcatatgatgtcacatttatagggtacat 219
Query: 121 ataaatattgggtcctaskagtattaatatagaatttatttttattatattcataataaa 180
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ataaatattgggtcctactagtattaatatagaatttatttttattatattcataataaa 159
Query: 181 atataaatrwktkcsccgggsgcctcgtccgaccctagggtcgtacgattggcgtccggg 240
|||||||| | | |||| |||||||||||||||||||||| |||| |||||||||||
Sbjct: 158 atataaataatttccccggacgcctcgtccgaccctagggtcggacga-tggcgtccggg 100
Query: 241 gtttatataatataagavataattcttattaaatcttatccccgcggtcttgttgccggg 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gtttatataatataagaaataattcttattaaatcttatccccgcggtcttgttgccggg 40
Query: 301 gtactccggcaacgagtcggggggc 325
|||||||||||||||||||||||||
Sbjct: 39 gtactccggcaacgagtcggggggc 15
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4065
Number of Sequences: 1807
Number of extensions: 4065
Number of successful extensions: 172
Number of sequences better than 1.0e-20: 1
length of query: 391
length of database: 10,358,551
effective HSP length: 15
effective length of query: 376
effective length of database: 10,331,446
effective search space: 3884623696
effective search space used: 3884623696
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)